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chembl-mcp-server

by FastDrop

MCP Verified 1 hour ago Registry import free

Link compounds to protein targets, rank bioactivity, and look up drug mechanisms and indications.

Link compounds to protein targets, rank bioactivity, and look up drug mechanisms and indications. Official MCP Registry: io.github.cyanheads/chembl-mcp-server@0.3.3. Remote endpoint: https://chembl.caseyjhand.com/mcp

Problem it solves

Discoverable MCP server listed in the official MCP Registry.

How it's different

Remote MCP endpoint ingested from the official registry and probed by FastDrop.

Ingested from the official MCP Registry

FastDrop pulled this entry from the official MCP Registry as io.github.cyanheads/chembl-mcp-server and probed the endpoint. The maker did not submit it, so the outbound link is not endorsed and the description is not theirs.

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Tools this endpoint exposes

Read directly from the endpoint on 11 Oct 2026. Not supplied by the maker.

  • chembl_search_molecules

    Discovery entry point for compounds. Find by name / ChEMBL ID / InChIKey with the default search_type=name (supply query), or run a structure search with search_type exact | similarity | substructure

  • chembl_get_bioactivities

    The flagship compound↔target bioactivity bridge: measurements for a molecule (target deconvolution / selectivity), a target (lead finding), or both together (how potently one compound hits one target)

  • chembl_search_targets

    Resolve a protein/gene/UniProt accession to the ChEMBL target ID that chembl_get_bioactivities needs for the target→leads workflow. Supply at least one of accession (UniProt, e.g. P00533), gene_symbol

  • chembl_get_drug_info

    Pharmacology for a drug (molecule): mechanism(s) of action, the molecular target(s) it acts on, action type (inhibitor / agonist / …), first-approval year, and clinical indications with the max phase

  • chembl_get_assay

    Assay provenance behind a bioactivity row: description, type (binding / functional / ADMET / toxicity), the target it measures, organism, and ChEMBL's 1–9 confidence score (9 = direct assay on the pro

  • chembl_dataframe_query

    Run a read-only SQL SELECT over the bioactivity rows chembl_get_bioactivities spilled to a canvas — rank, group, dedupe, and aggregate across the FULL set, not the inline preview. Reference each stage

  • chembl_dataframe_describe

    List the tables and columns staged on a canvas by chembl_get_bioactivities — inspect before calling chembl_dataframe_query to write correct SQL. Returns each table with its row count, kind (table | vi

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Matched on shared tags and the tools their MCP servers actually expose.

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